
/* 
A* -------------------------------------------------------------------
B* This file contains source code for the PyMOL computer program
C* copyright 1998-2000 by Warren Lyford Delano of DeLano Scientific. 
D* -------------------------------------------------------------------
E* It is unlawful to modify or remove this copyright notice.
F* -------------------------------------------------------------------
G* Please see the accompanying LICENSE file for further information. 
H* -------------------------------------------------------------------
I* Additional authors of this source file include:
-* 
-* 
-*
Z* -------------------------------------------------------------------
*/
#include"os_python.h"

#include"os_gl.h"

#include"Base.h"
#include"main.h"
#include"View.h"
#include"Ray.h"
#include"Setting.h"
#include"PConv.h"
#include"OVLexicon.h"
#include"Text.h"
#include"Feedback.h"
#include"Ortho.h"
#include"CGO.h"

int ViewElemModify(PyMOLGlobals* G, CViewElem** handle, ViewElemAction action, int index,
    int count, int target)
{
  int ok = true;
  CViewElem *vla = *handle;
  if(!vla) {
    vla = VLACalloc(CViewElem, 0);
  }
  if(vla) {
    int n_frame = VLAGetSize(vla);
    switch (action) {
    case ViewElemAction::Insert: 
      VLAInsert(vla,CViewElem,index,count);
      break;
    case ViewElemAction::Delete:
      VLADelete(vla,CViewElem,index,count);
      break;
    case ViewElemAction::Move:
      if((index>=0) && (target>=0) && (index<n_frame) && (target<n_frame)) {
        if((count>1)||(vla[index].specification_level>1)) {
          
          int i;
          for(i=0;i<count;i++) {
            if( ((i+index)<n_frame) && ((i+target)<n_frame)) {
              int src,dst;
              if(index>target) {
                src = index+i;
                dst = target+i;
              } else {
                src = index+(count-1)-i;
                dst = target+(count-1)-i;
              }
              memcpy(vla + dst, vla + src, sizeof(CViewElem));
              memset(vla + src, 0, sizeof(CViewElem));
            }
          }
        }
      }
      break;
    case ViewElemAction::Copy:
      if((index>=0) && (target>=0) && (index<n_frame) && (target<n_frame)) {
        if((count>1)||(vla[index].specification_level>1)) {
          int i;
          for(i=0;i<count;i++) {
            if( ((i+index)<n_frame) && ((i+target)<n_frame)) {
              int src,dst;
              if(index>target) {
                src = index+i;
                dst = target+i;
              } else {
                src = index+(count-1)-i;
                dst = target+(count-1)-i;
              }
            memcpy(vla + dst, vla + src, sizeof(CViewElem));
            }
          }
        }
      }
      break;
    }
  }
  *handle = vla;
  return ok;
}

int ViewElemXtoFrame(BlockRect *rect, int frames, int x, int nearest)
{
  int offset = 0;
  float width = (float) (rect->right - rect->left);
  float extra = (nearest ? 0.4999F : 0.0F);
  int frame = (int)(extra + (frames * (x - rect->left )) / width + offset);
  return frame;
}

void ViewElemDrawBox(PyMOLGlobals *G, BlockRect *rect, int first, int last,
                     int frames, float *color4,int fill , CGO *orthoCGO)
{  
  if(G->HaveGUI && G->ValidContext && rect) {
    int nDrawn = frames;
    int offset = 0;
    float width = (float) (rect->right - rect->left);
    float top = rect->top - 1;
    float bot = rect->bottom + 1;
    float start = (int)(rect->left + (width * (first - offset)) / nDrawn);
    float stop = (int)(rect->left + (width * (last - offset)) / nDrawn);
    if((stop - start) < 1.0F)
      stop = start+1.0F;
    if(fill) {
      glEnable(GL_BLEND);
      if (orthoCGO){
	float prevAlpha = orthoCGO->alpha;
	CGOAlpha(orthoCGO, color4[3]);
	CGOColorv(orthoCGO, color4);
	CGOBegin(orthoCGO, GL_TRIANGLE_STRIP);
	CGOVertex(orthoCGO, start, bot, 0.f);
	CGOVertex(orthoCGO, start, top, 0.f);
	CGOVertex(orthoCGO, stop, bot, 0.f);
	CGOVertex(orthoCGO, stop, top, 0.f);
	CGOEnd(orthoCGO);
	CGOAlpha(orthoCGO, prevAlpha);
      } else {
	glColor4fv(color4);
	glBegin(GL_POLYGON);
	glVertex2f(start, bot);
	glVertex2f(start, top);
	glVertex2f(stop, top);
	glVertex2f(stop, bot);
	glEnd();
      }
      glDisable(GL_BLEND);
    } else {
      if (orthoCGO){
	CGOLineAsTriangleStrips(orthoCGO, start, bot, stop, top);
      } else {
	glBegin(GL_LINE_LOOP);
	glVertex2f(start, bot);
	glVertex2f(start, top);
	glVertex2f(stop, top);
	glVertex2f(stop, bot);
	glEnd();
      }
    }
  }
}

void ViewElemDraw(PyMOLGlobals *G,
    const CViewElem * view_elem,
    const BlockRect *rect, int frames,
    const char *title , CGO *orthoCGO)
{
  if(G->HaveGUI && G->ValidContext && view_elem) {
    int size = VLAGetSize(view_elem);
    float width = (float) (rect->right - rect->left);
    float start = 0.0F, stop;
    const int last = size;
    float top = rect->top - 2;
    float bot = rect->bottom + 2;
    float mid_top = (int)((0.499F + 3 * top + 2 * bot) / 5);
    float mid_bot = (int)((0.499F + 2 * top + 3 * bot) / 5);
    float top_color[3] = { 0.6, 0.6, 1.0 };
    float key_color[3] = { 0.4, 0.4, 0.8 };
    float bar_color[3] = { 0.3, 0.3, 0.6 };
    float bot_color[3] = { 0.2, 0.2, 0.4 };
    int cur_level = -1, last_level = -1;
    int cur;
    for(cur = 0; cur <= last; cur++) {
      if(cur < last) {
          cur_level = view_elem->specification_level;
      } else {
        cur_level = -1;
      }
      if(cur_level != last_level) {
        stop = (int)(rect->left + (width * cur) / frames);
        switch (last_level) {
        case 0:
          break;
        case 1:
	  if (orthoCGO){
	    CGOColorv(orthoCGO, bar_color);
	    CGOBegin(orthoCGO, GL_TRIANGLE_STRIP);
	    CGOVertex(orthoCGO, start, mid_bot, 0.f);
	    CGOVertex(orthoCGO, start, mid_top, 0.f);
	    CGOVertex(orthoCGO, stop, mid_bot, 0.f);
	    CGOVertex(orthoCGO, stop, mid_top, 0.f);
	    CGOEnd(orthoCGO);
	  } else {
	    glColor3fv(bar_color);
	    glBegin(GL_POLYGON);
	    glVertex2f(start, mid_bot);
	    glVertex2f(start, mid_top);
	    glVertex2f(stop, mid_top);
	    glVertex2f(stop, mid_bot);
	    glEnd();
	  }
	  if (orthoCGO){
	    CGOBegin(orthoCGO, GL_TRIANGLE_STRIP);
	    CGOColorv(orthoCGO, key_color);
	    CGOVertex(orthoCGO, start, mid_top, 0.f);
	    CGOVertex(orthoCGO, start, mid_top+1, 0.f);
	    CGOVertex(orthoCGO, stop, mid_top, 0.f);
	    CGOVertex(orthoCGO, stop, mid_top+1, 0.f);
	    CGOEnd(orthoCGO);
	    CGOBegin(orthoCGO, GL_TRIANGLE_STRIP);
	    CGOColorv(orthoCGO, bot_color);
	    CGOVertex(orthoCGO, start, mid_bot-1, 0.f);
	    CGOVertex(orthoCGO, start, mid_bot, 0.f);
	    CGOVertex(orthoCGO, stop, mid_bot-1, 0.f);
	    CGOVertex(orthoCGO, stop, mid_bot, 0.f);
	    CGOEnd(orthoCGO);
	  } else {
	    glColor3fv(key_color);
	    glBegin(GL_LINES);
	    glVertex2f(start,mid_top);
	    glVertex2f(stop,mid_top);
	    glColor3fv(bot_color);
	    glVertex2f(start,mid_bot-1);
	    glVertex2f(stop,mid_bot-1);
	    glEnd();
	  }
          break;
        case 2:
          if((stop - start) < 1.0F)
            stop = start+1.0F;
	  if (orthoCGO){
	    CGOColorv(orthoCGO, key_color);
	    CGOBegin(orthoCGO, GL_TRIANGLE_STRIP);
	    CGOVertex(orthoCGO, start, bot, 0.f);
	    CGOVertex(orthoCGO, start, top, 0.f);
	    CGOVertex(orthoCGO, stop, bot, 0.f);
	    CGOVertex(orthoCGO, stop, top, 0.f);
	    CGOEnd(orthoCGO);
	  } else {
	    glColor3fv(key_color);
	    glBegin(GL_POLYGON);
	    glVertex2f(start, bot);
	    glVertex2f(start, top);
	    glVertex2f(stop, top);
	    glVertex2f(stop, bot);
	    glEnd();
	  }

	  if (orthoCGO){
	    CGOColorv(orthoCGO, bot_color);
	    CGOBegin(orthoCGO, GL_TRIANGLE_STRIP);
	    CGOVertex(orthoCGO, start,bot-1,0.f);
	    CGOVertex(orthoCGO, start,bot,0.f);
	    CGOVertex(orthoCGO, stop,bot-1,0.f);
	    CGOVertex(orthoCGO, stop,bot,0.f);
	    CGOEnd(orthoCGO);
	    CGOBegin(orthoCGO, GL_TRIANGLE_STRIP);
	    CGOVertex(orthoCGO, stop,bot,0.f);
	    CGOVertex(orthoCGO, stop,top,0.f);
	    CGOVertex(orthoCGO, stop+1,bot,0.f);
	    CGOVertex(orthoCGO, stop+1,top,0.f);
	    CGOEnd(orthoCGO);

	    CGOColorv(orthoCGO, top_color);
	    CGOBegin(orthoCGO, GL_TRIANGLE_STRIP);
	    CGOVertex(orthoCGO, start,top,0.f);
	    CGOVertex(orthoCGO, start,top+1,0.f);
	    CGOVertex(orthoCGO, stop,top,0.f);
	    CGOVertex(orthoCGO, stop,top+1,0.f);
	    CGOEnd(orthoCGO);	    

	    CGOBegin(orthoCGO, GL_TRIANGLE_STRIP);
	    CGOVertex(orthoCGO, start,bot,0.f);
	    CGOVertex(orthoCGO, start,top,0.f);
	    CGOVertex(orthoCGO, start+1,bot,0.f);
	    CGOVertex(orthoCGO, start+1,top,0.f);
	    CGOEnd(orthoCGO);
	  } else {
	    glBegin(GL_LINES);
	    glColor3fv(bot_color);
	    glVertex2f(start,bot-1);
	    glVertex2f(stop,bot-1);
	    glVertex2f(stop,bot);
	    glVertex2f(stop,top);
	    glColor3fv(top_color);
	    glVertex2f(start,top);
	    glVertex2f(stop,top);
	    glVertex2f(start,bot);
	    glVertex2f(start,top);
	    glEnd();
	  }
          break;
        }
        start = stop;
      }
      last_level = cur_level;
      view_elem++;
    }

    if(title)
      ViewElemDrawLabel(G, title, rect, orthoCGO);
  }
}

void ViewElemDrawLabel(
    PyMOLGlobals* G, const char* label, const BlockRect* rect, CGO* orthoCGO)
{
  TextDrawStrAt(
      G, label, rect->right + 1, (rect->bottom + rect->top) / 2 - 3, orthoCGO);
}

void ViewElemCopy(PyMOLGlobals * G, const CViewElem * src, CViewElem * dst)
{
  if(dst->scene_flag && dst->scene_name) {
    OVLexicon_DecRef(G->Lexicon, dst->scene_name);
  }
  *dst = *src;
  if(dst->scene_flag && dst->scene_name) {
    OVLexicon_IncRef(G->Lexicon, dst->scene_name);
  }
}

void ViewElemArrayPurge(PyMOLGlobals * G, CViewElem * view, int nFrame)
{
  int a;
  for(a = 0; a < nFrame; a++) {
    if(view->scene_flag && view->scene_name) {
      OVLexicon_DecRef(G->Lexicon, view->scene_name);
      view->scene_name = 0;
      view->scene_flag = false;
    }
    view++;
  }
}

PyObject *ViewElemAsPyList(PyMOLGlobals * G, const CViewElem * view)
{
#ifdef _PYMOL_NOPY
  return nullptr;
#else
  PyObject *result = nullptr;

  result = PyList_New(21);

  if(result) {
    PyList_SetItem(result, 0, PyInt_FromLong(view->matrix_flag));
    if(view->matrix_flag) {
      PyList_SetItem(result, 1, PConvDoubleArrayToPyList(view->matrix, 16));
    } else {
      PyList_SetItem(result, 1, PConvAutoNone(nullptr));
    }

    PyList_SetItem(result, 2, PyInt_FromLong(view->pre_flag));
    if(view->pre_flag) {
      PyList_SetItem(result, 3, PConvDoubleArrayToPyList(view->pre, 3));
    } else {
      PyList_SetItem(result, 3, PConvAutoNone(nullptr));
    }

    PyList_SetItem(result, 4, PyInt_FromLong(view->post_flag));
    if(view->post_flag) {
      PyList_SetItem(result, 5, PConvDoubleArrayToPyList(view->post, 3));
    } else {
      PyList_SetItem(result, 5, PConvAutoNone(nullptr));
    }

    PyList_SetItem(result, 6, PyInt_FromLong(view->clip_flag));
    if(view->post_flag) {
      PyList_SetItem(result, 7, PyFloat_FromDouble((double) view->front));
      PyList_SetItem(result, 8, PyFloat_FromDouble((double) view->back));
    } else {
      PyList_SetItem(result, 7, PConvAutoNone(nullptr));
      PyList_SetItem(result, 8, PConvAutoNone(nullptr));
    }

    PyList_SetItem(result, 9, PyInt_FromLong(view->ortho_flag));
    if(view->ortho_flag) {
      PyList_SetItem(result, 10, PyFloat_FromDouble(view->ortho));
    } else {
      PyList_SetItem(result, 10, PConvAutoNone(nullptr));
    }

    PyList_SetItem(result, 11, PyInt_FromLong(view->view_mode));

    PyList_SetItem(result, 12, PyInt_FromLong(view->specification_level));

    PyList_SetItem(result, 13, PyInt_FromLong(view->scene_flag));

    if(view->scene_flag && view->scene_name) {
      char null_st[1] = "";
      char *st = null_st;

      st = OVLexicon_FetchCString(G->Lexicon, view->scene_name);
      PyList_SetItem(result, 14, PyString_FromString(st));
    } else {
      PyList_SetItem(result, 14, PyInt_FromLong(0));
    }

    PyList_SetItem(result, 15, PyInt_FromLong(view->power_flag));
    if(view->ortho_flag) {
      PyList_SetItem(result, 16, PyFloat_FromDouble(view->power));
    } else {
      PyList_SetItem(result, 16, PConvAutoNone(nullptr));
    }

    PyList_SetItem(result, 17, PyInt_FromLong(view->bias_flag));
    if(view->bias_flag) {
      PyList_SetItem(result, 18, PyFloat_FromDouble(view->bias));
    } else {
      PyList_SetItem(result, 18, PConvAutoNone(nullptr));
    }

    PyList_SetItem(result, 19, PyInt_FromLong(view->state_flag));
    if(view->state_flag) {
      PyList_SetItem(result, 20, PyInt_FromLong(view->state));
    } else {
      PyList_SetItem(result, 20, PConvAutoNone(nullptr));
    }

  }

  return PConvAutoNone(result);
#endif
}

int ViewElemFromPyList(PyMOLGlobals * G, PyObject * list, CViewElem * view)
{
  int ok = true;
  ov_size ll = 0;

  if(ok)
    ok = (list != nullptr);
  if(ok)
    ok = PyList_Check(list);
  if(ok)
    ok = ((ll = PyList_Size(list)) > 11);

  if(ok)
    ok = PConvPyIntToInt(PyList_GetItem(list, 0), &view->matrix_flag);
  if(ok && view->matrix_flag)
    ok = PConvPyListToDoubleArrayInPlace(PyList_GetItem(list, 1), view->matrix, 16);

  if(ok)
    ok = PConvPyIntToInt(PyList_GetItem(list, 2), &view->pre_flag);
  if(ok && view->pre_flag)
    ok = PConvPyListToDoubleArrayInPlace(PyList_GetItem(list, 3), view->pre, 3);

  if(ok)
    ok = PConvPyIntToInt(PyList_GetItem(list, 4), &view->post_flag);
  if(ok && view->post_flag)
    ok = PConvPyListToDoubleArrayInPlace(PyList_GetItem(list, 5), view->post, 3);

  if(ok)
    ok = PConvPyIntToInt(PyList_GetItem(list, 6), &view->clip_flag);
  if(view->post_flag) {
    if(ok)
      ok = PConvPyFloatToFloat(PyList_GetItem(list, 7), &view->front);
    if(ok)
      ok = PConvPyFloatToFloat(PyList_GetItem(list, 8), &view->back);
  }

  if(ok)
    ok = PConvPyIntToInt(PyList_GetItem(list, 9), &view->ortho_flag);
  if(ok && view->ortho_flag) {
    ok = PConvPyFloatToFloat(PyList_GetItem(list, 10), &view->ortho);
    if(!ok) {
      int dummy_int;
      ok = PConvPyIntToInt(PyList_GetItem(list, 10), &dummy_int);
      view->ortho = dummy_int;
    }
  }

  if(ok)
    ok = PConvPyIntToInt(PyList_GetItem(list, 11), &view->view_mode);
  if(ok)
    ok = PConvPyIntToInt(PyList_GetItem(list, 12), &view->specification_level);

  if(ok & (ll > 14)) {
    if(ok)
      ok = PConvPyIntToInt(PyList_GetItem(list, 13), &view->scene_flag);
    if(ok && view->scene_flag) {
      const char *ptr = nullptr;
      view->scene_flag = false;
      if(PConvPyStrToStrPtr(PyList_GetItem(list, 14), &ptr)) {
        OVreturn_word result = OVLexicon_GetFromCString(G->Lexicon, ptr);
        if(OVreturn_IS_OK(result)) {
          view->scene_name = result.word;
          view->scene_flag = true;
        }
      }
    }
  }
  if(ok && (ll>16)) {
    ok = PConvPyIntToInt(PyList_GetItem(list, 15), &view->power_flag);
    if(ok && view->power_flag) {
      ok = PConvPyFloatToFloat(PyList_GetItem(list, 16), &view->power);
    } else {
      view->power = 0.0F;
    }
  }
  if(ok && (ll>18)) {
    ok = PConvPyIntToInt(PyList_GetItem(list, 17), &view->bias_flag);
    if(ok && view->bias_flag) {
      ok = PConvPyFloatToFloat(PyList_GetItem(list, 18), &view->bias);
    } else {
      view->bias = 1.0F;
    }
  }
  if(ok && (ll>20)) {
    ok = PConvPyIntToInt(PyList_GetItem(list, 19), &view->state_flag);
    if(ok && view->state_flag) {
      ok = PConvPyIntToInt(PyList_GetItem(list, 20), &view->state);
    } else {
      view->state = 0;
    }
  }
  return ok;
}

int ViewElemVLAFromPyList(PyMOLGlobals * G, PyObject * list, CViewElem ** vla_ptr,
                          int nFrame)
{
  int ok = true;
  CViewElem *vla = nullptr;
  if(ok)
    ok = (list != nullptr);
  if(ok)
    ok = PyList_Check(list);
  if(ok)
    ok = (PyList_Size(list) == nFrame);
  if(ok)
    ok = ((vla = VLACalloc(CViewElem, nFrame)) != nullptr);
  if(ok) {
    int a;
    for(a = 0; a < nFrame; a++) {
      if(ok)
        ok = ViewElemFromPyList(G, PyList_GetItem(list, a), vla + a);
      else
        break;
    }
  }
  if(!ok) {
    VLAFreeP(vla);
  } else
    *vla_ptr = vla;
  return ok;
}

PyObject *ViewElemVLAAsPyList(PyMOLGlobals * G, const CViewElem * vla, int nFrame)
{
#ifdef _PYMOL_NOPY
  return nullptr;
#else

  PyObject *result = nullptr;
  int a;
  result = PyList_New(nFrame);
  for(a = 0; a < nFrame; a++) {
    PyList_SetItem(result, a, ViewElemAsPyList(G, vla + a));
  }
  return (PConvAutoNone(result));
#endif
}

CView *ViewNew(PyMOLGlobals * G)
{
  auto I = new CView();
  I->G = G;
  return I;
}

void ViewFree(CView * I)
{
  if(I)
    VLAFreeP(I->View);
}

CViewIterator ViewGetIterator(CView * I)
{
  return 0;
}

int ViewIterate(CView * I, CViewIterator * iter, CRay * ray, int at_least_once)
{
  int result;
  CViewElem *elem = nullptr;

  if((!I) || (!I->NView)) {     /* trusting short-circuit to avoid segfault */
    if(at_least_once) {
      if(!*iter) {              /* do loop at least once if asked to do so */
        *iter = 1;
        result = true;
      } else
        result = false;
    } else {
      result = false;
    }
  } else {
    if(*iter < I->NView) {
      elem = I->View + (*iter)++;
      result = true;
    } else
      result = false;
  }
  if(elem) {                    /* are we to apply a transformation? */
    if(ray) {

    } else if(I->G->HaveGUI && I->G->ValidContext) {

      if(elem->pre_flag) {
        /* move the camera to the location we are looking at */
#ifdef PURE_OPENGL_ES_2
        /* TODO */
#else
        glTranslated(elem->pre[0], elem->pre[1], elem->pre[2]);
#endif	
      }

      if(elem->matrix_flag) {
        /* rotate about the origin (the the center of rotation) */
#ifdef PURE_OPENGL_ES_2
        /* TODO */
#else
        glMultMatrixd(elem->matrix);
#endif
      }

      if(elem->post_flag) {
        /* move the origin to the center of rotation */
#ifdef PURE_OPENGL_ES_2
        /* TODO */
#else
	glTranslated(elem->post[0], elem->post[1], elem->post[2]);
#endif
      }

    }
  }
  return result;
}

static void matrix_interpolate(Matrix53f imat, Matrix53f mat,
                               float *pivot_point,
                               float *bisect_dir,
                               float *rot_axis,
                               float rotate_angle,
                               float *trans_axis,
                               float translate_angle, float fxn, float linearity)
{
  int a;
  float pos[3], adj[3], opp[3], oppdir[3];
  float p0[3], p1[3], center[3];
  float hyplen, adjlen, opplen;
  float tAlpha;

  rotation_to_matrix(imat, rot_axis, fxn * rotate_angle);

  /*           ______--------______
   *        /____________          \
   *     /   \   opp     |adj         \
   *   |      \          |        trans   | 
   * (CM)---------------------------------->(CM)
   *    \       \        |               /
   *       \      \hyp   |-bisect_dir  /
   *          \p0   \    |        p1/
   *             \    \  |        /
   *                \  \ |     /     
   *                   \\v  /
   *            <--------O pivot
   *                      F-raxis
   */

  subtract3f(&mat[3][0], pivot_point, p0);
  subtract3f(&mat[4][0], pivot_point, p1);

  hyplen = (float) length3f(p0);

  average3f(&mat[3][0], &mat[4][0], center);

  cross_product3f(bisect_dir, trans_axis, oppdir);
  normalize3f(oppdir);

  tAlpha = (float) (fabs(0.5 - fxn) * translate_angle);
  opplen = (float) fabs(hyplen * sin(tAlpha));
  adjlen = (float) fabs(hyplen * cos(tAlpha));

  scale3f(oppdir, opplen, opp);
  scale3f(bisect_dir, -adjlen, adj);

  add3f(pivot_point, adj, pos);

  if(fxn <= 0.5) {
    add3f(pos, opp, pos);
  } else {
    subtract3f(pos, opp, pos);
  }

  /* straight linear for now... */

  for(a = 0; a < 3; a++) {
    imat[4][a] = (float) ((((1.0 - fxn) * mat[3][a] + fxn * mat[4][a]) * linearity) +
                          (1.0 - linearity) * pos[a]);
  }
}

int ViewElemSmooth(CViewElem * first, CViewElem * last, int window, int loop)
{
  ov_diff n = (last - first) + 1;
  int delta;
  if(window > n)
    window = (int) n;
  delta = (window - 1) / 2;
  if(n && delta) {
    CViewElem *cpy = pymol::malloc<CViewElem>((n + 2 * delta));
    CViewElem *src, *dst;
    int a, b, c, cnt;
    memcpy(cpy + delta, first, sizeof(CViewElem) * n);
    if(loop) {
      for(a = 0; a < delta; a++) {
        memcpy(cpy + a, last - delta + a, sizeof(CViewElem));
        memcpy(cpy + (delta + n) + a, first + a, sizeof(CViewElem));
      }
    } else {
      for(a = 0; a < delta; a++) {
        memcpy(cpy + a, first, sizeof(CViewElem));
        memcpy(cpy + (delta + n) + a, last, sizeof(CViewElem));
      }
    }
    for(a = 0; a < n; a++) {
      int above, below;
      dst = first + a;

      above = delta;
      below = delta;
      if(above > a)
        above = a;
      if(below > ((n - 1) - a))
        below = (int) ((n - 1) - a);

      if(dst->specification_level) {    /* has to be specified */

        if(dst->matrix_flag) {
          cnt = 1;
          for(b = -below; b <= above; b++) {
            if(b) {
              src = cpy + delta + a + b;
              if(src->matrix_flag) {
                cnt++;
                for(c = 0; c < 16; c++) {
                  dst->matrix[c] += src->matrix[c];
                }
              }
            }
          }
          for(c = 0; c < 16; c++) {
            dst->matrix[c] /= cnt;
          }
          reorient44d(dst->matrix);     /* convert those averages into a valid matrix */
        }

        if(dst->pre_flag) {
          cnt = 1;
          for(b = -below; b <= above; b++) {
            if(b) {
              src = cpy + delta + a + b;
              if(src->pre_flag) {
                cnt++;
                for(c = 0; c < 3; c++) {
                  dst->pre[c] += src->pre[c];
                }
              }
            }
          }
          for(c = 0; c < 3; c++) {
            dst->pre[c] /= cnt;
          }
        }

        if(dst->post_flag) {
          cnt = 1;
          for(b = -below; b <= above; b++) {
            if(b) {
              src = cpy + delta + a + b;
              if(src->post_flag) {
                cnt++;
                for(c = 0; c < 3; c++) {
                  dst->post[c] += src->post[c];
                }
              }
            }
          }
          for(c = 0; c < 3; c++) {
            dst->post[c] /= cnt;
          }
        }

        if(dst->clip_flag) {
          cnt = 1;
          for(b = -below; b <= above; b++) {
            if(b) {
              src = cpy + delta + a + b;
              if(src->clip_flag) {
                cnt++;
                dst->front += src->front;
                dst->back += src->back;
              }
            }
          }
          dst->front /= cnt;
          dst->back /= cnt;
        }

      }
    }
    FreeP(cpy);
  }
  return 1;
}

int ViewElemInterpolate(PyMOLGlobals * G, CViewElem * first, CViewElem * last,
                        float power, float bias,
                        int simple, float linearity, int hand, float cut)
{
  float first3x3[9];
  float last3x3[9];
  float inverse3x3[9];
  float inter3x3[9];
  float rot_axis[3], trans_axis[3] = { 0.0F, 0.0F, 0.0F };
  float angle;
  CViewElem *current;
  ov_diff n = (last - first) - 1;
  Matrix53f rot, imat;
  int a;
  float tVector[3], tCenter[3], tDir[3];
  float tLen = 0.0F;
  float bisect[3], v2[3];
  float translate_angle = 0.0F;
  float pivot[3] = { 0.0F, 0.0F, 0.0F };
  const float _1 = 1.0F, _p5 = 0.5F;
  int parabolic = true;
  int timing_flag;
  double timing = 0.0F;
  int state_flag;
  int state = 0;
  float pre[3];
  float firstC44f[16], firstRTTT[16], firstR44f[16];
  float lastC44f[16], lastRTTT[16], lastR44f[16];
  int linear = false;
  int debug = Feedback(G,FB_Movie, FB_Debugging);
  
  if(hand == 0)
    hand = 1;

  if(debug) {
    printf("ViewElemInterpolate: %8.3f %8.3f %d %8.3f %d %8.3f\n",
           power, bias, simple, linearity, hand, cut);
    dump44d(first->matrix,"first->matrix");
    dump44d(last->matrix,"last->matrix");
    printf("first->pre_flag %d first->post_flag %d\n",first->pre_flag, first->post_flag);
    dump3d(first->pre,"first->pre");
    dump3d(first->post,"first->post");
    printf("last->pre_flag %d last->post_flag %d\n",last->pre_flag, last->post_flag);
    dump3d(last->pre,"last->pre");
    dump3d(last->post,"last->post");
  }
  if(power == 0.0F) {
    if(first->power_flag && last->power_flag) {
      if(((first->power > 0.0F) && (last->power > 0.0F)) ||
         ((first->power < 0.0F) && (last->power < 0.0F))) {
        power = (first->power + last->power) / 2.0F;
      } else if(fabs(first->power) > fabs(last->power)) {
        power = first->power;
      } else if(last->power < 0.0F) {
        power = last->power;
      } else {
        power = first->power;
      }
    } else if(first->power_flag) {
      power = first->power;
    } else if(last->power_flag) {
      power = last->power;
    } else {
      power = 1.4F; /* default */
    }
  }
  if(power < 0.0F) {
    parabolic = false;
    power = -power;
  }

  if(bias < 0.0F) { /* default */
    if(first->bias_flag && last->bias_flag) {
      if((first->bias > 0.0F) && (last->bias > 0.0F)) {
        bias = (first->bias * 1.0F/last->bias);
      } else if(fabs(first->bias) > 0.0) {
        bias = first->bias;
      } else if(last->bias > 0.0F) {
        bias = 1.0F/last->bias;
      } else {
        bias = 1.0F;
      }
    } else if(first->bias_flag) {
      bias = first->bias;
    } else if(last->bias_flag) {
      bias = 1.0F/last->bias;
    } else {
      bias = 1.0F; /* default */
    }
  }

  if(bias <= 0.0F) {
    bias = 1.0F;
  }

  /* WARNING: this routine is operating on column-major matrices!!! */

  copy44d33f(first->matrix, first3x3);
  copy44d33f(last->matrix, last3x3);

  transpose33f33f(first3x3, inverse3x3);

  multiply33f33f(inverse3x3, last3x3, &rot[0][0]);      /* [rot] = [first]^-1 [last] */
  matrix_to_rotation(rot, rot_axis, &angle);

  if(debug)
    dump3f(rot_axis, "rot_axis");

  if(hand) {
    if((cPI - fabs(angle)) < 0.01F) {   /* this a complete 180 degree motion */
      if(((rot_axis[0] * 0.7F + rot_axis[1] * 0.8F + rot_axis[2] * 0.9F) * hand * angle) >
         0.0F) {
        invert3f(rot_axis);
        if(angle > 0) {
          angle = (float) ((2 * cPI) - angle);
        } else {
          angle = (float) (-(2 * cPI) - angle);
        }
      }
    }
  }

  if(!simple) {
    /* switch back into row major to promote developer sanity */

    copy33f44f(first3x3, firstC44f);
    copy33f44f(last3x3, lastC44f);

    transpose44f44f(firstC44f, firstRTTT);
    transpose44f44f(lastC44f, lastRTTT);

    /* form TTTs */

    firstRTTT[12] = (float) -first->pre[0];
    firstRTTT[13] = (float) -first->pre[1];
    firstRTTT[14] = (float) -first->pre[2];

    firstRTTT[3] = (float) first->post[0];
    firstRTTT[7] = (float) first->post[1];
    firstRTTT[11] = (float) first->post[2];

    lastRTTT[12] = (float) -last->pre[0];
    lastRTTT[13] = (float) -last->pre[1];
    lastRTTT[14] = (float) -last->pre[2];

    lastRTTT[3] = (float) last->post[0];
    lastRTTT[7] = (float) last->post[1];
    lastRTTT[11] = (float) last->post[2];

    if(debug)
      dump44f(firstRTTT, "firstRTTT");
    if(debug)
      dump44f(lastRTTT, "lastRTTT");

    /* convert to homogenous */

    convertTTTfR44f(firstRTTT, firstR44f);
    convertTTTfR44f(lastRTTT, lastR44f);

    /* reset both matrices to a common origin */

    {
      float first_pre[3], last_pre[3];
      float post[4], *dst;

      copy3d3f(first->pre, first_pre);
      copy3d3f(last->pre, last_pre);
      average3f(first_pre, last_pre, pre);

      transform44f3fas33f3f(firstR44f, pre, post);
      copy44f(firstR44f, firstRTTT);
      firstRTTT[3] += post[0];
      firstRTTT[7] += post[1];
      firstRTTT[11] += post[2];
      dst = firstRTTT + 12;
      invert3f3f(pre, dst);

      transform44f3fas33f3f(lastR44f, pre, post);
      copy44f(lastR44f, lastRTTT);
      lastRTTT[3] += post[0];
      lastRTTT[7] += post[1];
      lastRTTT[11] += post[2];
      dst = lastRTTT + 12;
      invert3f3f(pre, dst);
    }

    if(debug)
      dump44f(firstRTTT, "firstRTTT");
    if(debug)
      dump44f(lastRTTT, "lastRTTT");

    /*    convertTTTfR44f(firstRTTT, firstR44f);
       convertTTTfR44f(lastRTTT, lastR44f); */

    /* now populate the translation fields */

    rot[3][0] = firstRTTT[3];
    rot[3][1] = firstRTTT[7];
    rot[3][2] = firstRTTT[11];

    rot[4][0] = lastRTTT[3];
    rot[4][1] = lastRTTT[7];
    rot[4][2] = lastRTTT[11];

    /* now set up the interpolation */

    subtract3f(&rot[4][0], &rot[3][0], tVector);
    tLen = (float) length3f(tVector);
    average3f(&rot[4][0], &rot[3][0], tCenter);

    if(tLen < 0.0001F) {
      if(debug)
        printf("translation too short %8.3f\n", tLen);
      simple = true;
    }
  }

  if(!simple) {

    normalize23f(tVector, tDir);
    if(debug)
      dump3f(tDir, "tDir");
    cross_product3f(tDir, rot_axis, bisect);
    /* bisect is a vector in the translation arc */
    if(length3f(bisect) < 0.0001F) {
      if(debug)
        printf("rotation coincident with translation\n");
      linear = true;
    }
  }

  if(!(simple || linear)) {
    normalize3f(bisect);

    /* this section needs work... */

    cross_product3f(bisect, tDir, trans_axis);
    normalize3f(trans_axis);

    transform33Tf3f(&rot[0][0], bisect, v2);    /* column major */

    remove_component3f(v2, trans_axis, v2);
    normalize3f(v2);            /* project vector onto plane _|_ to axis */

    if(debug) {
      dump3f(rot_axis, "rot_axis");
      dump3f(tDir, "tDir");
      dump3f(bisect, "bisect");
      dump3f(trans_axis, "trans_axis");
      dump3f(v2, "v2");
    }

    {
      double dot = dot_product3f(bisect, v2);
      if(dot < -1.0F)
        dot = -1.0F;
      if(dot > 1.0F)
        dot = 1.0F;
      translate_angle = (float) acos(dot);

      /* if translation angle > rotation angle then sets translation angle 
       * to same as rotation angle, with proper sign of course */

      if((fabs(translate_angle) > fabs(angle)) && (fabs(angle) > R_SMALL4)) {
        translate_angle = (float) (fabs(angle) * (translate_angle / fabs(angle)));
      }

      if(fabs(translate_angle) < 0.0001F) {
        linear = true;
        if(debug)
          printf("no significant rotation\n");
      }

      if((translate_angle * angle) < 0.0F) {
        /* if motions are in opposing directions, then flip translation axis and location */
        invert3f(bisect);
        invert3f(trans_axis);
      }

    }
  }

  if(!(simple || linear)) {
    float pLen = (float) tan(translate_angle / 2);
    if(fabs(pLen) > 0.0000001)
      pLen = (tLen / 2) / pLen;
    else {
      if(debug)
        printf("pLen too short %8.3f\n", pLen);
      simple = true;
    }

    if(!simple) {
      pivot[0] = tCenter[0] + pLen * bisect[0];
      pivot[1] = tCenter[1] + pLen * bisect[1];
      pivot[2] = tCenter[2] + pLen * bisect[2];
    }

    if(debug && !simple) {
      dump3f(tCenter, "center");
      dump3f(pivot, "pivot");
      printf("pLen %8.3f angle %8.3f translate_angle %8.3f\n",
             pLen, angle, translate_angle);
    }
  }

  /* now interpolate */

  state_flag = first->state_flag && last->state_flag;

  timing_flag = first->timing_flag && last->timing_flag;

  current = first + 1;

  if(debug)
    dump44f(firstR44f, "first");

  for(a = 0; a < n; a++) {
    double fxn = (a + 1.0) / (n + 1.0);
    double fxn_1 = 1.0 - fxn;

    if(timing_flag) {
      timing = (first->timing * fxn_1) + (last->timing * fxn);
    }

    if(state_flag) { /* states are interpolated linearly by default */
      state = (int)(first->state * (1.0F - fxn) + (last->state * fxn) + 0.499F);
    }

    if(bias != 1.0F) {
      fxn = 1 - (float) pow(1 - pow(fxn, bias), _1 / bias);
    }

    if((power != 1.0F) || (!parabolic)) {
      if(fxn < 0.5F) {
        if(!parabolic)
          fxn = (float) ((_1 - cos(cPI * fxn)) * _p5);  /* circular */
        fxn = (float) pow(fxn * 2.0F, power) * _p5;     /* parabolic */
      } else if(fxn > 0.5F) {
        fxn = _1 - fxn;
        if(!parabolic)
          fxn = (float) ((_1 - cos(cPI * fxn)) * _p5);
        fxn = (float) pow(fxn * 2.0F, power) * _p5;     /* parabolic */
        fxn = _1 - fxn;
      }
    }

    fxn_1 = 1.0F - fxn;

    ViewElemCopy(G, first, current);

    if(simple) {
      rotation_matrix3f(fxn * angle, rot_axis[0], rot_axis[1], rot_axis[2], &imat[0][0]);


/* [cur] = [first] [partial-rot], so....
   at start: [cur] = [first] [identity] = [first]
   at end: [cur] = [first] [first]^-1 [last] = [last] 
*/
      current->matrix_flag = true;
      multiply33f33f(first3x3, &imat[0][0], inter3x3);

      copy33f44d(inter3x3, current->matrix);

      if(first->pre_flag && last->pre_flag) {
        mix3d(first->pre, last->pre, (double) fxn, current->pre);
        current->pre_flag = true;
      } else {
        current->pre_flag = false;
      }
      if(first->post_flag && last->post_flag) {
        mix3d(first->post, last->post, (double) fxn, current->post);
        current->post_flag = true;
      } else {
        current->post_flag = false;
      }
    } else if(linear) {
      int b;
      rotation_matrix3f(fxn * angle, rot_axis[0], rot_axis[1], rot_axis[2], &imat[0][0]);
      current->matrix_flag = true;
      multiply33f33f(first3x3, &imat[0][0], inter3x3);

      copy33f44d(inter3x3, current->matrix);

      current->pre_flag = true;
      copy3f3d(pre, current->pre);

      current->post_flag = true;
      for(b = 0; b < 3; b++) {
        imat[4][b] = (float) ((1.0 - fxn) * rot[3][b] + fxn * rot[4][b]);
      }
      copy3f3d(&imat[4][0], current->post);
    } else {
      matrix_interpolate(imat, rot,
                         pivot, bisect,
                         rot_axis, angle, trans_axis, translate_angle, fxn, linearity);

      current->matrix_flag = true;
      multiply33f33f(first3x3, &imat[0][0], inter3x3);

      copy33f44d(inter3x3, current->matrix);

      current->pre_flag = true;
      copy3f3d(pre, current->pre);

      current->post_flag = true;
      copy3f3d(&imat[4][0], current->post);

    }
    if(debug) {
      if((a == 0) || (a == n - 1)) {
        float curC44f[16], curRTTT[16], curR44f[16];

        copy33f44f(inter3x3, curC44f);

        transpose44f44f(curC44f, curRTTT);

        /* form TTTs */

        curRTTT[12] = (float) -current->pre[0];
        curRTTT[13] = (float) -current->pre[1];
        curRTTT[14] = (float) -current->pre[2];

        curRTTT[3] = (float) current->post[0];
        curRTTT[7] = (float) current->post[1];
        curRTTT[11] = (float) current->post[2];

        convertTTTfR44f(curRTTT, curR44f);
        dump44f(curR44f, "cur");
      }
    }

    if(first->clip_flag && last->clip_flag) {
      current->front = first->front * fxn_1 + last->front * fxn;
      current->back = first->back * fxn_1 + last->back * fxn;
      current->clip_flag = true;
    } else {
      current->clip_flag = false;
    }

    if(first->ortho_flag && last->ortho_flag) {
      float approx_ortho = first->ortho * fxn_1 + last->ortho * fxn;
      if(first->pre_flag && last->pre_flag) {
        float first_far = first->pre[2] * tan(cPI * fabs(first->ortho) / 360.0);
        float last_far = last->pre[2] * tan(cPI * fabs(last->ortho) / 360.0);

        float cur_far = first_far * fxn_1 + last_far * fxn;
        current->ortho = 360.0 * atan(cur_far / current->pre[2]) / cPI;

        if((current->ortho * approx_ortho) < 0) /* fix sign */
          current->ortho = -current->ortho;
      } else {
        current->ortho = approx_ortho;
      }
    }
    current->specification_level = 1;

    if(state_flag) {
      current->state_flag = true;
      current->state = state;
    }

    if(timing_flag) {
      current->timing_flag = true;
      current->timing = timing;
    }


    if(first->scene_flag && last->scene_flag) {
      if(current->scene_name) {
        OVLexicon_DecRef(G->Lexicon, current->scene_name);
      }
      current->scene_flag = true;
      if(fxn >= cut) {
        current->scene_name = last->scene_name;
      } else {
        current->scene_name = first->scene_name;
      }
      OVLexicon_IncRef(G->Lexicon, current->scene_name);
    }
    current++;
  }
  if(debug)
    dump44f(lastR44f, "last");

  return 1;
}

void TTTToViewElem(float *TTT, CViewElem * elem)
{
  float *fp = TTT;
  double *dp;

  /* convert row-major TTT to column-major ViewElem */

  elem->matrix_flag = true;
  dp = elem->matrix;

  dp[0] = (double) fp[0];
  dp[1] = (double) fp[4];
  dp[2] = (double) fp[8];
  dp[3] = 0.0;

  dp[4] = (double) fp[1];
  dp[5] = (double) fp[5];
  dp[6] = (double) fp[9];
  dp[7] = 0.0;

  dp[8] = (double) fp[2];
  dp[9] = (double) fp[6];
  dp[10] = (double) fp[10];
  dp[11] = 0.0;

  dp[12] = 0.0;
  dp[13] = 0.0;
  dp[14] = 0.0;
  dp[15] = 1.0;

  /* copy inverse pre */

  elem->pre_flag = true;
  dp = elem->pre;
  *(dp++) = (double) -TTT[12];
  *(dp++) = (double) -TTT[13];
  *(dp++) = (double) -TTT[14];

  /* copy post */

  elem->post_flag = true;
  dp = elem->post;
  *(dp++) = (double) TTT[3];
  *(dp++) = (double) TTT[7];
  *(dp++) = (double) TTT[11];

}

void TTTFromViewElem(float *TTT, CViewElem * elem)
{
  float *fp = TTT;
  double *dp;

  if(elem->matrix_flag) {
    dp = elem->matrix;

    fp[0] = (float) dp[0];
    fp[1] = (float) dp[4];
    fp[2] = (float) dp[8];
    fp[3] = 0.0;

    fp[4] = (float) dp[1];
    fp[5] = (float) dp[5];
    fp[6] = (float) dp[9];
    fp[7] = 0.0;

    fp[8] = (float) dp[2];
    fp[9] = (float) dp[6];
    fp[10] = (float) dp[10];
    fp[11] = 0.0;

    fp[12] = 0.0;
    fp[13] = 0.0;
    fp[14] = 0.0;
    fp[15] = 1.0;
  }

  if(elem->pre_flag) {
    dp = elem->pre;
    fp[12] = (float) (-*(dp++));
    fp[13] = (float) (-*(dp++));
    fp[14] = (float) (-*(dp++));
  }

  if(elem->post_flag) {
    dp = elem->post;
    fp[3] = (float) *(dp++);
    fp[7] = (float) *(dp++);
    fp[11] = (float) *(dp++);
  }
  fp[15] = 1.0F;
}
